• Chen JJ, Zhan HY, Pang YB, Cheng YJ, Deng XX, Xu J (2015) Comparative study of flavonoid production in lycopene-accumulated and blonde-flesh sweet oranges (Citrus sinensis) during fruit development. Food Chemistry 184: 238-246
  • Fang YN, Zheng BB, Wang L, Yang W, Wu XM, Xu Q, Guo WW (2016) High-throughput sequencing and degradome analysis reveal altered expression of miRNAs and their targets in a male-sterile cybrid pummelo (Citrus grandis). BMC Genomics 17:591
  • Huang XS, Wang W, Zhang Q, Liu JH (2013) A basic Helix-Loop-Helix transcription factor PtrbHLH of Poncirus trifoliata confers cold tolerance and modulates POD-mediated scavenging of H2O2. Plant Physiology 162: 1178–1194
  • Jiao WB, Huang D, Xing F, Hu YB, Deng XX, Xu Q, Chen LL (2013) Genome-wide characterization and expression analysis of genetic variants in sweet orange. Plant Journal 75: 954-964.
  • Long JM, Liu Z, Wu XM, Fang YN, Jia HH, Xie ZZ, Deng XX, Guo WW (2016) Genome-scale mRNA and small RNA transcriptomic insights into initiation of citrus apomixis. Journal of Experimental Botany 67: 5743–5756
  • Ma QL, Ding YD, Chang JW, Sun XH, Zhang L, Wei QJ, Cheng YJ, Chen LL, Xu J and Deng XX (2014) Comprehensive insights on how 2,4-dichlorophenoxyacetic acid retards senescence in post-harvest citrus fruits using transcriptomic and proteomic approaches. Journal of Experimental Botany 65: 61-74
  • Wu H, Fu B, Sun PP, Xiao C, Liu JH (2016) A NAC transcription factor represses putrescine biosynthesis and affects drought tolerance. Plant Physiology, doi/10.1104/pp.16.01096
  • Wu JX, Xu Z, Zhang Y, Chai L., Yi HL, Deng XX (2014) An integrative analysis of the transcriptome and proteome of the pulp of a spontaneous late-ripening sweet orange mutant and its wild type improves our understanding of fruit ripening in citrus. J Exp Bot 65: 1651-1671
  • Wu XM, Kou SJ, Liu YL, Fang YN, Xu Q, Guo WW (2015) Genome-wide analysis of small RNAs in non-embryogenic and embryogenic tissues of citrus: microRNA and siRNA mediated transcript cleavage involved in somatic embryogenesis. Plant Biotechnology Journal 13: 383-394
  • Xiao SX, Biswas MK, Li MY, Deng XX, Xu Q, Guo WW (2014) Production and molecular characterization of diploid and tetraploid somatic cybrid plants between male sterile Satsuma mandarin and seedy sweet orange cultivars. Plant Cell Tissue Organ Culture 116: 81-88
  • Xu Q, Ruan XA, Chen LL,Chen DJ, Zhu AD……. Deng XX, Ruan YJ (2013) The draft genome of sweet orange (Citrus sinensis). Nature Genetics 45: 59-66
  • Yuduan Ding, Jiwei Chang, Qiaoli Ma, Lingling Chen, Shuzhen Liu, Shuai Jin, Jingwen Han, Rangwei Xu, Andan Zhu, Jing Guo, Yi Luo, Juan Xu, Qiang Xu, YunLiu Zeng, Xiuxin Deng, and Yunjiang Cheng (2015) Network analysis of postharvest senescence process in citrus fruits revealed by transcriptomic and metabolomic profiling. Plant Physiology 168: 357–376
  • Zeng YL, Du J, Wang L, Pan ZY, Xu Q, Xiao SY, Deng XX (2015) A comprehensive analysis of chromoplast differentiation reveals complex protein changes associated with plastoglobule biogenesis and remodelling of protein systems in orange flesh. Plant Physiology 168: 1648-1665
  • Zeng YL, Pan ZY, Ding YD, Zhu AD, Cao HB, Xu Q, Deng XX (2011) A proteomic analysis of the chromoplasts isolated from sweet orange fruits [Citrus sinensis (L.) Osbeck]. Journal of Experimental Botany 62: 5297-309
  • Zhang JZ, Liu SR, Hu CG (2016) Identifying the genome-wide genetic variation between precocious trifoliate orange and its wild type and developing new markers for genetics research. DNA Research. 123:403-414